Metandem - A Data Analysis Tool for Isobaric Labeling-based Metabolomics
Overview
Metandem is a free online data analysis platform for mass spectrometry-based isobaric labeling metabolomics. It allows users to upload and process MS or hyphenated MS data files for isobaric-labeling-based quantitative and qualitative metabolomics analyses, including feature extraction, metabolite quantification, metabolite identification, batch processing of multiple data files, parameter optimization, median normalization, and statistical analysis. Results can be downloaded or visualized online.
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References
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Hao, L.; Zhu, Y.; Wei, P.; Johnson, J.; Buchberger, A.; Frost, D.; Kao, W.J.; Li, L. Metandem: An Online Software Tool for Mass Spectrometry-based Isobaric Labeling Metabolomics Analytica Chimica Acta, 2019.
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Hao, L.; Johnson, J.; Lietz, C. B.; Buchberger, A.; Frost, D.; Kao, W. J.; Li, L. Mass Defect-Based N,N-Dimethyl Leucine Labels for Quantitative Proteomics and Amine Metabolomics of Pancreatic Cancer Cells Anal Chem, 2017, 89, 1138-1146.
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Hao, L.; Zhong, X. F.; Greer, T.; Ye, H.; Li, L. Relative quantification of amine-containing metabolites using isobaric N,N-dimethyl leucine (DiLeu) reagents via LC-ESI-MS/MS and CE-ESI-MS/MS Analyst 2015, 140, 467-475.
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Frost, D. C.; Greer, T.; Li, L. High-Resolution Enabled 12-Plex DiLeu Isobaric Tags for Quantitative Proteomics Anal Chem 2015, 87, 1646-1654.
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Xiang, F.; Ye, H.; Chen, R. B.; Fu, Q.; Li, L. N,N-Dimethyl Leucines as Novel Isobaric Tandem Mass Tags for Quantitative Proteomics and Peptidomics Anal Chem 2010, 82, 2817-2825.
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